Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX251094: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-221851' containing sample 'Escherichia coli HVH 142 (4-5627451)'
1 ILLUMINA (Illumina HiSeq 2000) run: 2M spots, 401.7M bases, 198.9Mb downloads

UUID: 2ce7861a-7979-4114-933b-64001d294801

Design: Illumina sequencing of Escherichia coli HVH 142 (4-5627451) via random selection

Submitted by: Broad Institute (BI)

Study: E coli UTI Bacteremia

PRJNA186174 • SRP019106 • All experiments • All runs

Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 142 (4-5627451)

SAMN01885787 • SRS399652 • All experiments • All runs

Organism: Escherichia coli HVH 142 (4-5627451)

Library:

Name: Pond-221851

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 289758.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3VHN8

material_type: DNA:DNA Somatic

product_order: PDO-291

product_part_number: P-MCV-0001

project: G30175

research_project: RP-192

root_sample_id: SM-2TD15

sample_id: SM-3VHN8

work_request: 35112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-08 22:34:25.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2M spots, 401.7M bases, 198.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR784174	1,988,845	401.7M	198.9Mb	2013-03-18

ID:: 351018

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